DICOM @ OFFIS

Jörg, you saved my life again, it works without problems now. Thank you very much!

None of my trials worked. Can you please check the files to see whether you can read them using DCMTK? http://rapidshare.com/files/164101677/orthodonty_forum.zip.html I am constantly getting segfaults but MATLAB can read and show the files, so I am assuming they are not corrupted. I create a DicomIm...

Hello everyone, I have been reading DICOM images for a while (both single and multiframe), I just got another CT data but my code did not work for that. I debugged the code, the point where it crashes is: DicomImage *di = new DicomImage ( dfile, xfer, opt_compatibilityMode , 0, 0); ... const DiPixel...

I previously tried to change it to Uint32 but got a seg fault. I think I need some debugging.

First, I create a DicomImage. Then, I use getInterData() to get a DiPixel*. Next, I use getData() and cast the result to Uint16*, which is the original representation. Then, using VTK, I obtain a scalar pointer of type Uint16* to my image and fill it by using the casted values. Finally, I cast the v...

Might be shifted by one slice but I do not think that is much of a problem, it is clear that textures are totally different.

http://rapidshare.com/files/156815381/G ... 5.dcm.html

Yes, dcm2pnm works. I have uploaded two images, the output of my program and the output of MATLAB. Might give you an idea.

http://rapidshare.com/files/156805557/l ... s.zip.html

What additional information should I provide?

Hello everyone, I have a liver dicom file which I am reading with DCMTK and displaying with VTK. Unfortunately, some details which are not in the actual image show up, as I am checking it with MATLAB. I checked the byte order (LittleEndian, BigEndian) but there is no problem with it. I also changed ...

It worked! Thank you very much Jorg!

As you have stated out, there are 900 orientation vectors and 1020 b-values (repeating for 60 slices).

It is a little bit clearer now. I learned that there are 17 B-values and 17 DiffusionGradientOrientation vectors in this multiframe image. I am probably finding the first B-value and the DiffusionGradientOrientation whereas dcmdump reports some other values(probably the last). I mean, they are both ...

It seems a little weird to give a rapidshare link, but I could not think of a better alternative:) http://rapidshare.com/files/154652144/sample_multiframe.dcm.html For DiffusionGradientOrientation, I get -0.499998, -0.499998, -0.70711 but dcmdump gives 0.70584, -0.706335, 0.0536699. For DiffusionBVa...

Actually, I cannot say that I have understood what you mean. Following the example in the dcmdata documentation, I am trying to extract tags. Where do I exactly need to specify the sequence item? Here is the my whole code for the part that reads tags: DcmFileFormat dicom_img; OFCondition status = di...

OK, I am now able to extract some values but not the correct ones. I use the following code to extract DiffusionBValue: if ( !flag && (tag.toString() == "(0018,9087)") && dicom_img.getDataset() -> findAndGetFloat64 ( tag, patientsY, position, OFTrue ).good() ) { cout << pat...

Oh how can I not see that! Thank you very much Jorg. I have another question though. What does 'pos' exactly stand for? The documentation says 'index of the value in case of multi-valued elements (0..vm-1)' but I cannot get it as I am new in the field. I don't know the value I should use to extract ...

I have previously stated my problem by replying to a relevant post but could not get an answer. So I am setting the same question forth: I am trying to read some tags from a Philips DICOM image. I am able to read simple tags like patients name, sex, etc. However, I cannot get DiffusionBValue and Dif...